PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D02G0710
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 333aa    MW: 37042.5 Da    PI: 8.2921
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D02G0710genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.91e-08172230563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr++r   NR +A rs +RK  ++ eLe+kv++L++e + L  ++ +l+     l++e+
  Gh_D02G0710 172 KRAKRILANRQSAARSKERKIRYTNELEKKVQTLQTEATNLSAQVTMLQRDTTGLTTEN 230
                  9********************************************99998888777776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-15168232IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.024170233IPR004827Basic-leucine zipper domain
PfamPF077167.2E-8170221IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.9E-11172226No hitNo description
SuperFamilySSF579595.49E-11172224No hitNo description
CDDcd147033.52E-23173222No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MEQKLRMEID QMPPRGAHHR RAHSDTTFRF DDLLLFDPSD LDLSCLDLPD SSSNPSLPPV  60
TPVPAESSDD SSCNGPPRSI LNNPRHIRSL SVDSDFFDGL GLTGPAISGG AGDEKFGGKR  120
GAGEKRVHHR HSNSMDGSTT ASFDVESLMA VDGVKKTMAP DRLAELALID PKRAKRILAN  180
RQSAARSKER KIRYTNELEK KVQTLQTEAT NLSAQVTMLQ RDTTGLTTEN KELKLRLQAM  240
EQQAQLRDAL NEKLKEEVQR LRIQAGQVSA MNGNPFNRGL SPQYSTHQPA PHHFGVLQTP  300
QQQQQQQQLQ MPHSSTNNPT LNGQPQPRFM DFN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.95690.0boll| ovule
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ5272191e-123HQ527219.1 Gossypium herbaceum clone NBRI_B_2579 simple sequence repeat marker, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007019465.11e-174VIRE2-interacting protein 1, putative
SwissprotQ9MA752e-95VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A061FHA91e-174A0A061FHA9_THECC; VIRE2-interacting protein 1, putative
STRINGVIT_18s0076g00330.t011e-129(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM79932639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.11e-81VIRE2-interacting protein 1